What is the Hybrid Rat Diversity Panel (HRDP)?
- Panel of 96 inbred rat strains with genetic and phenotypic diversity
- 33 genetically diverse “classic” inbred strains
- Two recombinant inbred (RI) panels: FXLE/LEXF (33 strains, Japan) and HXB/BXH (30 strains, Czech Republic)
- To learn more about recombinant inbred strains, click here
What resources are available for the HRDP?
- Many of the HRDP strains are currently available for experiments. Contact HRDP for details.
- Whole genome sequence data (VCF files for download, variants integrated into Variant Visualizer)
- Quantitative phenotype measurements can be explored through PhenoMiner
How do the HRDP strains relate to the Heterogenous Stock (HS) founder strains?
- Based on sequence similarity, the best match from the HRDP inbred strains has been identified for each of the HS founder strains.
- For more information about the HRDP strains matched to the HS founders, click here
Classic Inbred Strains | ||||
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Strain | Strain Available | Phenominer Data | Variant Visualizer Data | |
ACI | ACI/EurMcwi | ![]() |
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BDIX | BDIX/NemOdaMcwi | ![]() |
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BN | BN/NHsdMcwi | ![]() |
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BN-Lx | BN-Lx/CubMcwi | ![]() |
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BUF | BUF/MnaMcwi | ![]() |
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COP | COP/HsdUwmRrrc | ![]() |
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DA | DA/OlaHsd | ![]() |
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F344 | F344/DuCrl, F344/NCrl, F344/StmMcwi | ![]() |
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FHH | FHH/EurMcwi | ![]() |
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GK | GK/FarMcwi | ![]() |
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HTX | HTX/KyoMcwi | ![]() |
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LE | LE/StmMcwi | ![]() |
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LEW | LEW/Crl | ![]() |
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LH | LH/MavRrrcAek | ![]() |
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LL | LL/MavRrrcAek | ![]() |
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LN | LN/MavRrrcAek | ![]() |
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M520 | M520/NRrrcMcwi | ![]() |
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MNS | MNS/NMcwi | ![]() |
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MR | MR/NRrrc | ![]() |
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MWF | MWF/SimwMcwi | ![]() |
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PD | PD/Cub | ![]() |
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PVG | PVG/SeacMcwi | ![]() |
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RCS | RCS/LavRrrcMcwi | ![]() |
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SBH | SBH/Ygl | ![]() |
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SBN | SBN/Ygl | ![]() |
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SHR | SHR/OlaIpcvMcwi | ![]() |
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SHRSP | SHRSP/A3NCrl | ![]() |
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SR | SR/JrHsd | ![]() |
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SS | SS/HsdMcwiCrl, SS/JrHsdMcwi | ![]() |
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WAG | WAG/RijCrl | ![]() |
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WKY | WKY/NCrl | ![]() |
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HXB/BXH Recombinant Inbred Panel Strains | ||||
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Strain | Strain Available | Phenominer Data | Variant Visualizer Data | |
BN-Lx | BN-Lx/CubMcwi | ![]() |
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BXH10/Cub | ![]() |
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BXH11/Cub | ![]() |
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BXH12/Cub | BXH12/CubMcwi | ![]() |
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BXH13/Cub | BXH13/CubMcwi | ![]() |
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BXH2/Cub | BXH2/CubMcwi | ![]() |
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BXH3/Cub | ![]() |
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BXH5/Cub | ![]() |
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BXH6/Cub | BXH6/CubMcwi | ![]() |
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BXH8/Cub | ![]() |
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BXH9/Cub | ![]() |
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HXB1/Ipcv | HXB1/IpcvMcwi | ![]() |
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HXB10/Ipcv | HXB10/IpcvMcwi | ![]() |
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HXB13/Ipcv | HXB13/IpcvMcwi | ![]() |
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HXB15/Ipcv | ![]() |
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HXB17/Ipcv | HXB17/IpcvMcwi | ![]() |
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HXB18/Ipcv | HXB18/IpcvMcwi | ![]() |
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HXB2/Ipcv | HXB2/IpcvMcwi | ![]() |
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HXB20/Ipcv | ![]() |
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HXB21/Ipcv | ![]() |
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HXB22/Ipcv | ![]() |
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HXB23/Ipcv | HXB23/IpcvMcwi | ![]() |
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HXB24/Ipcv | ![]() |
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HXB25/Ipcv | ![]() |
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HXB27/Ipcv | ![]() |
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HXB29/Ipcv | ![]() |
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HXB3/Ipcv | ![]() |
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HXB31/Ipcv | HXB31/IpcvMcwi | ![]() |
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HXB4/Ipcv | HXB4/IpcvMcwi | ![]() |
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HXB5/Ipcv | ![]() |
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HXB7/Ipcv | HXB7/IpcvMcwi | ![]() |
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SHR | SHR/OlaIpcvMcwi | ![]() |
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